Gene Expression Table

Click on ORF in Name column to get to NCBI data.

Click on size in Transcript Size column to see a diagram of mRNA structures.

IE=Immediate Early

		Transcript			Protein
Name	Orien tation	Size (kb)	Splicing	Classi fication	Start	Stop	Size (aa)	Putative Function
ORF K1	+		No		105	974	289
ORF 4	+		No		1142	2794	550	Complement binding protein
ORF 6	+			Early	3210	6611	1133	ssDNA binding protein
ORF 7	+			Early	6628	8715	695	Transport protein
ORF 8	+			Late	8699	11,236	845	Glycoprotein B
ORF 9	+		No	Early	11,363	14,401	1012	DNA polymerase
ORF 10	+				14,519	15,775	418
ORF 11	+				15,790	17,013	407
ORF K2	-	1.3	No	Early	17,875	17,261	204	IL6 homolog (vIL-6)
ORF 2	-		No		18,553	17,921	210	DHFR
ORF K3	-	2.0	Yes		19,609	18,608	333	Inhibits MHC class I expression
		1.5
ORF 70	-	2.2			21,104	20,091	337	Thymidylate synthase
ORF K4	-	0.8	No	Early	21,832	21,548	94	Cellular MIP-I homolog (vMIP-II)
ORF K4.1			No
ORF K4.2		2.0	No	IE
ORF K5	-	1.2	Yes	IE/Early	26,483	25,713	257	Inhibits MHC class I expression
ORF K6	-	0.9	No	Early	27,424	27,137	95	Cellular MIP-I homolog (vMIP-I)
ORF K7	+				28,622	29,002	126
PAN RNA(T1.1)	+	1.1	No	Early	28,661	29,741
ORF 16	+			Early	30,145	30,672	175	Bcl-2 homolog
ORF 17	-			Early	32,482	30,821	553	Capsid protein
ORF 18	+				32,424	33,197	257
ORF 19	-			Early	34,843	33,194	549	Tegument protein
ORF 20	-			Late	35,573	34,611	320
ORF 21	+			Early	35,383	37,125	580	Thymidine kinase
ORF 22	+			Late	37,113	39,305	730	Glycoprotein H
ORF 23	-				40,516	39,302	404
ORF 24	-				42,778	40,520	752
ORF 25	+			Late	42,777	46,907	1376	Major capsid protein
ORF 26	+			Late	46,933	47,850	305	Minor capsid protein
ORF 27	+			Late	47,873	48,745	290
ORF 28	+			Late	48,991	49,299	102
ORF 29b	-	2.6	Yes	IE	50,417	49,362	351	Immediate-early protein
	-	2.1	Yes	Early				Packaging protein
ORF 30	+			Late	50,623	50,856	77
ORF 31	+			Early	50,763	51,437	224
ORF 32	+			Late	51,404	52,768	454
ORF 33	+			Late	52,761	53,699	312
ORF 29a	-	2.1		Early	54,676	53,738	312	Packaging protein
ORF 34	+				54,675	55,658	327
ORF 35	+				55,639	56,091	151
ORF 36	+		No	Early	55,976	57,310	444	Serine protein kinase
ORF 37	+			Early	57,273	58,733	486	Alkaline exonuclease
ORF 38	+				58,688	58,873	61
ORF 39	-			Late	60,175	58,976	399	Glycoprotein M
ORF 40	+			Early	60,308	61,681	457	Helicase-primase
ORF 41	+			Early	61,827	62,444	205	Helicase-primase
ORF 42	-			Late	63,272	62,436	278
ORF 43	-			Late	64,953	63,136	605	Capsid protein
ORF 44	+			Early	64,892	67,258	788	Helicase-primase
ORF 45	-	1.7		IE	68,576	67,353	407	Immediate-early protein
ORF 46	-			Early	69,404	68,637	255	Uracil DNA glucosidase
ORF 47	-			Late	69,915	69,412	167	Glycoprotein L
ORF 48	-	2.6	Yes	IE	71,381	70,173	402	Immediate-early protein
ORF 49	-	1.3		Early	72,538	71,630	302
ORF 50	+	3.6-3.8	Yes	IE	71,596	74,629	631	Transactivator
		4.3		Early
T3.0 RNA	-	3.0		Early
ORF K8	+	1.3	Yes	Early	74,850	75,569	239	bZip protein
ORF K8.1		0.7	Yes	Late	75,915	76,695		Glycoprotein
		0.6	Yes	Late
ORF K8.2
ORF 52	-			Late	77,197	76,802	131
ORF 53	-			Late	77,665	77,333	110
ORF 54	+			Early	77,667	78,623	318	dUTPase
ORF 55	-			Late	79,448	78,765	227
ORF 56	+			Early	79,436	81,967	843	DNA replication protein
ORF 57	+	1.4	Yes	Early	82,717	83,544	275	Post-transcriptional regulator
ORF K9	-		No	Early	85,209	83,860	449	Interferon regulatory factor homolog (vIRF-1)
ORF K10	-				88,164	86,074	696
ORF K10.1	-		Yes	Latent
ORF K10.2
ORF K10.5	-	2.2	Yes	Latent	91,394	89,601	566	Latent nuclear antigen (LANA-2); Cellular interferon regulatory factor homolog (vIRF-3)
ORF K10.6	-				91,394	90,936	139
ORF K11	-				93,365	91,964	467
ORF K11.1			No				163	vIRF-2
ORF 58	-		No	Late	95,544	94,471	357
ORF 59	-	2.4	No	Early	96,739	95,549	396	DNA replication processivity factor
ORF 60	-	6.0		Early	97,787	96,870	305	Ribonucleotide reductase, small
ORF 61	-			Early	100,194	97,816	792	Ribonucleotide reductase, large
ORF 62	-			Late	101,194	100,199	331	Assembly/DNA maturation
ORF 63	+			Early	101,208	103,994	927	Tegument protein
ORF 64	+			Early	104,000	111,907	2635	Tegument protein
ORF 65	-		No		112,443	111,931	170	Capsid protein
ORF 66	-			Early	113,759	112,470	429
ORF 67	-			Early	114,508	113,693	271	Tegument protein
ORF 68	+			Early	114,768	116,405	545	Glycoprotein
ORF 69	+			Early	116,669	117,346	225
ORF K12	-	0.7		Latent	118,101	117,919	60	Kaposin
ORF 71 (K13)	-	1.7		Latent	122,710	122,291	139	vFLIP
ORF 72	-	1.7	Yes	Latent	123,566	122,793	257	Viral cyclin D homolog (vCyclin)
ORF 73	-	5.8	Yes	Latent	127,296	123,808	1162	LANA
		5.4
ORF K14	+	2.7	Yes		127,883	128,929	348	OX-2 homolog
		2.6
ORF 74	+	2.7	Yes	Early	129,391	130,399	342	G-protein coupled receptor
ORF 75	-		No		134,440	130,550	1296	Tegument protein/FGARAT
ORF K15	-	4.5-7.5	Yes		136,772	134,762	400-500 (489)	Transmembrane protein, EBV LMP-1,-2 homolog

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